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Commits : Listings

  Analyzed about 14 hours ago based on code collected about 14 hours ago.
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Commit Message Contributor Files Modified Lines Added Lines Removed Code Location Date
added Tarjei Mikkelsen's module for working with the KEGG database Anon32
jchang
More... almost 12 years ago
Removed usage of UNIX-specific '/'s and switched to using os.path.join Anon32
Brad Chapman
as chapmanb
More... almost 12 years ago
Removed UNIX specific file names and replaced with os-generic os.path.join Anon32
Brad Chapman
as chapmanb
More... almost 12 years ago
Added InterPro directory to setup file. Anon32
Brad Chapman
as chapmanb
More... almost 12 years ago
small bugfixes Anon32
thomas
More... almost 12 years ago
fixed GC_skew added xGC_skew Anon32
thomas
More... almost 12 years ago
added nt_search Anon32
thomas
More... almost 12 years ago
added six_frame_translations ala DNA Strider/XBBtools Anon32
thomas
More... almost 12 years ago
added quick FASTA reader changed command line options added fasta_uniqids Anon32
thomas
More... almost 12 years ago
*** empty log message *** Anon32
thomas
More... almost 12 years ago
sequtils is a temporary bucket for sequence utilities all functions can be used on multi FASTA files from the command line via the function multi_fasta_to. to get a list of functions type: sequtils.py describe most functions should probably be moved into better locations functions: complement, revertse, antiparallel, translate GC, GC123, GC_skew, Accumulated_GC_skew, xAccumulated_GC_skew molecular_weight multi_fasta_to makeTableX, proteinX, MissingTable Anon32
thomas
More... almost 12 years ago
added count method to Seq extended Seq.__add__ to accept a string ... Anon32
thomas
More... almost 12 years ago
*** empty log message *** Anon32
katel
More... almost 12 years ago
*** empty log message *** Anon32
katel
More... almost 12 years ago
*** empty log message *** Anon32
katel
More... almost 12 years ago
*** empty log message *** Anon32
katel
More... almost 12 years ago
blast query line does not require a space between the number and the seq. now accepts: Query: 100tt 101 found by Masahir Ishikawa Anon32
jchang
More... almost 12 years ago
second attempt to commit this simple example for xkMeans.py Anon32
thomas
More... almost 12 years ago
arghgh maybe my commit works this time !!! Anon32
thomas
More... almost 12 years ago
Added a small graphical interface for Jeff's kMeans. Anon32
thomas
More... almost 12 years ago
 
 
 

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