IntroductionThis is a code repository of the tools generally used in Hanlab in analyzing large scale biological datasets. Feel free to use the code and discuss the coding details with the authors. We value your advices!
DescriptionHere is a list of the tools contained in the repository:
KGML2SIF: KEGG KGML file parser GPL: GEO GPL parser SOFT: GEO SOFT format data parser HomoloGene: NCBI HomoloGene parser GeneInfo: NCBI GeneInfo data parser Gene2accession: NCBI Gene2accession data parser GOKEGGEnrich: GO/KEGG Enrichment tool PAGE: Parametric Analysis of Gene Set Enrichment BLASTParser: parsing BLAST output results GSEparser: GEO GSE data parser
More will be included. See Wiki for the usages of the tools.
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