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XML-based data exchange standard for phylogenetics. In honor of the commonly-used "nexus" flat file format, the working title for this standard is nexml.
phyloXML is an XML language for the analysis, exchange, and storage of phylogenetic trees (or networks) and associated data. The structure of phyloXML is described by XML Schema Definition (XSD) language. A shortcoming of current formats for describing phylogenetic trees (such as Nexus and ... [More]
ATV is a Java tool for the visualization of annotated phylogenetic trees. It can be used both as applets (ATVe, ATVapplet) and as a standalone application.