Projects tagged ‘bio-informatics’ and ‘visualization’

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Projects tagged ‘bio-informatics’ and ‘visualization’

Filtered by Project Tags bio-informatics visualization

Refine results Project Tags chemistry (6) java (5) research (4) molecular_science (4) cheminformatics (4) c++ (4) bioinformatics (4) biology (3) science (2) genetics (2) visualisation (2) cross-platform (2)

[13 total ]

11 Users
Jmol

Jmol is a Java molecular viewer for three-dimensional chemical structures. Features include reading a variety of file types and output from quantum chemistry programs, and animation of multi-frame ... [More] files and computed normal modes from quantum programs. [Less]
Created over 3 years ago.

8 Users
Avogadro
   

Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas. It offers flexible rendering and a powerful plugin architecture.
Created over 3 years ago.

4 Users
Bioclipse
   

The Bioclipse project is aimed at creating a Java-based, open source, visual platform for chemo- and bioinformatics based on the Eclipse Rich Client Platform (RCP). Bioclipse, as any RCP application ... [More] , is based on a plugin architecture that inherits basic functionality and visual interfaces from Eclipse, such as help system, software updates, preferences, cross-platform deployment etc. [Less]
Created over 3 years ago.

4 Users
JChemPaint Applet and Swing Application
   

JChemPaint is a program for drawing 2D chemical structures like those found in most chemistry textbooks.
Created over 3 years ago.

2 Users
QuteMol

QuteMol is an open source (GPL), interactive, high quality molecular visualization system. QuteMol exploits the current GPU capabilities through OpenGL shaders to offers an array of innovative visual ... [More] effects. QuteMol visualization techniques are aimed at improving clarity and an easier understanding of the 3D shape and structure of large molecules or complex proteins. * Real Time Ambient Occlusion * Depth Aware Silhouette Enhancement * Ball and Sticks, Space-Fill and Liquorice visualization modes * High resolution antialiased snapshots for creating publication quality renderings * Automatic generation of animated gifs of rotating molecules for web pages animations * Interactive rendering of large molecules and protein (>100k atoms) * Standard PDB input [Less]
Created over 3 years ago.

1 Users
ATV
 

ATV is a Java tool for the visualization of annotated phylogenetic trees. It can be used both as applets (ATVe, ATVapplet) and as a standalone application.
Created 11 months ago.

1 Users
GenoViz
 

The GenoViz project provides tools for genomics data visualization. It consists of the following: 1) the GenoViz SDK, a library of re-usable components, 2) the Genometry data model to represent ... [More] relationships between biological sequences, and 3) the Integrated Genome Browser (IGB, "igbee"), an application built upon the GenoViz SDK and Genometry for visualization and exploration of genomes and corresponding annotations from multiple data sources. IGB supports the Distributed Annotation System (DAS) protocol, version 1 and 2, as well as other optimized binary data formats that are designed for efficient exploration of large, whole genome data sets. [Less]
Created over 2 years ago.

0 Users
BioDivMap

This software uses data gathered from published biodiversity inventories, together with physical and vegetational maps, to build a biodiversity map (darkening geographical landscape according with the richness/diversity of species).
Created 5 months ago.

0 Users
BINViz

Created 12 months ago.
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