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Doxygen is a documentation system for C++, C, Java, Objective-C, Python, IDL (Corba and Microsoft flavors), Fortran, VHDL, PHP, C#, and to some extent D. Doxygen is developed under Linux and Mac OS X, but is set-up to be highly portable. As a result, it runs on most other Unix flavors as well. Furthermore, executables for Windows are available.
Sphinx is a tool that makes it easy to create intelligent and beautiful documentation for Python projects.
C++ documentation tool with greatly styled output. Supports templates, overloads, lots of graps. Simple to use. Just execute program in source folder. Current stable version is 1.05 June 2010