Projects

Insight Toolkit

Insight Segmentation and Registration Toolkit (ITK) is an open-source software system to support the Visible Human Project. Currently under active development, ITK employs leading-edge segmentation and registration algorithms in two, three, and more dimensions.

Slicer4

The ultimate 3D Segmentation, Registration and Visualization System - now as a QT application!

OTB

ORFEO Toolbox (OTB) is distributed as an open source library of image processing algorithms. OTB is based on the medical image processing library ITK and offers particular functionalities for remote sensing image processing in general and for high spatial resolution images in particular. OTB is ... [More] distributed under a free software licence CeCILL (similar to GPL) to encourage contribution from users and to promote reproducible research. The library is intensively tested on several platforms as Linux, Unix and Windows. Most functionnalies are also adapted to process huge images using streaming and multithreading as often as possible. [Less]

BRAINSTools

A suite of tools for medical image processing focused on brain analysis

OTB Applications

This package includes a set of applications for remote sensing image processing such as orthorectification, classification, object extraction... Few of these applications come with a full GUI interface. Applications are based on the Orfeo Toolbox (OTB) library. More complex applications are now ... [More] developed in the integrated application: Monteverdi. OTB Applications is distributed under a free software licence CeCILL (similar to GPL) to encourage contribution from users and to promote reproducible research. [Less]

contrib-itk

Some contributions to be integrated in ITK

smisdk

SMISDK is a completely free for research DICOM Volume Analysis Software Development Kit. Disclaimer: SMISDK is not approved for clinical or diagnostic usage and should not be relied upon for any diagnostic decisions. It is provided 'as is' and any risks associated with its misuse or lack ... [More] of quality lie completely with the user. The only purpose of SMISDK is to support and enhance research in the area of medical imaging. This project is another step in the direction of the mission statement of Science.Medical.Imaging group: "Gather thoughts from the fields of acquisition, communication and understanding of medical images for better image guided diagnostics and treatment. " The hope is to amalgamate the best of medical imaging physics, applied mathematics, computer science, medicine, and visualization in the pursuit. We are trying to share free and opensource resources in the pursuit of this goal as and when possible. Examples of free resources shared already: - an open source project for research: DICOM Volume Analysis Software Development Kit (SMISDK) - a completely free for research: DICOM Volume Analyzer (SMIViewer) - a completely free for research: DICOM Volume Analysis Software Development Kit - numerous discussions on image analysis - testing data - conference invitations - online paper resources - and growing.... Please visit the group here for more details: http://groups.google.com/group/medicalimagingscience. [Less]

neurons

Detection, tracking, segmentation, and delineation of neurons in microscopic images and videos. Conferences Wiki

VIGRA

VIGRA stands for "Vision with Generic Algorithms". It's a novel computer vision library that puts its main emphasis on customizable algorithms and data structures. By using template techniques similar to those in the C++ Standard Template Library, you can easily adapt any VIGRA ... [More] component to the needs of your application, without thereby giving up execution speed. As of version 1.7.1, VIGRA also provides extensive Python bindings on the basis of the popular numpy framework. [Less]