Projects tagged ‘kepler’

The Kepler scientific workflow system is an open source application designed to help scien­tists, analysts, and computer programmers solve the problem of analyzing data stored in a variety of formats ... [More] with software components deployed and invoked in different ways. Using Kepler's graphical user interface, users simply select and then connect pertinent analytical components and data sources to create a "scientific workflow"—an executable representation of the steps required to generate results. The Kepler software helps users share and reuse data, workflows, and compo­nents developed by the scientific community to address common needs. [Less]

A set of components for Lua that make up a powerful Web development platform. It is also the name of the project that is developing the Kepler platform.

Ajato is a CMS (Content Management System) using Lua as scripting language. Ajato can be a Blog, an eCommerce site, a Social Network, a Project manager. Ajato can be ALL OF THEM togheter! Ajato ... [More] uses Kepler project to deal with Web, SQL and XML. It is deeply inpired by Drupal CMS . [Less]

Ptolemy II is a software framework developed as part of the Ptolemy Project. It is a Java-based component assembly framework with a graphical user interface called Vergil. Vergil itself is a component ... [More] assembly defined in Ptolemy II. The Ptolemy project studies modeling, simulation, and design of concurrent, real-time, embedded systems. The focus is on assembly of concurrent components. The key underlying principle in the project is the use of well-defined models of computation that govern the interactions between components. A major problem area being addressed is the use of heterogeneous mixtures of models of computation. The work is conducted in the EECS Department of the University of California, Berkeley. [Less]

Sputnik is a wiki written in Lua and running on top of Kepler. It is also a platform for building a range of wiki-like applications, drawing on Lua's strengths as an extension language. Out of the ... [More] box Sputnik behaves like a wiki with all the standard wiki features: editable pages, mild protection against spam bots (you need an account to edit pages, but anyone can create an account with no questions asked), history view of pages, diff, preview, per-page-RSS feed for site changes. At the same time, Sputnik is designed to be used as a platform for a wide range of "social software" applications. A simple change of templates and perhaps a few spoons of Lua code can turn it into a photo album, a blog, a calendar, a mailing list viewer, or almost anything else. Demos are available on the site. [Less]

This Project is an Integrated Development Environment for applications based on Actor Petri net Model. Actor Petri net Model can be an essential base model of Software Development. It can make you ... [More] develop software in a real iterative way and see the running of your software, containing element changes (add elements, delete elements, revise elements), intermediate data management (store, retrieve, revise), and so on. This Model and it's IDE is inspired by the Ptolemy II Project and Kepler Project, Petri nets, DFL (Data-Flow Language), Workflow Patterns, and the technology of scientific workflows. Actor Petri net Model will change the develop method and the business operation model of software product. Every applications are assembled by users or service providers. And an application can run on several machines as long as services and the running environment are provided. Actor Petri net Model will be the foundation of Desktop Operation Systems, and it will let us see the running of applications. It will result in software security techniques to security itself, not on just how to find malice code. Every machines' Master can set the access authority of basic element to restrict provided services, and can see the running of services, elements and intermediate data. In future, APnM-IDE (Actor Petri net Model Integrated Development Environment) will embrace Knowledge Representation and Reasoning, especially Description Languages, to assist users to assemble or develop their applications. This inspiration can be found at Taverna (OMII) and K-Wf Grid. [Less]

KeplerWeka adds the functionality of the open-source machine learning and data mining workbench WEKA to the free and open-source, scientific workflow application, Kepler.

Trabalhos da Dispiplina AED 2009 - MMC - UFJF

This is a duplicate entry for Sputnik.

A Kepler workflow designed to automate the essential bioinformatic tasks from 16S rDNA contigs to biological interpretation and analysis. Programs that are bundled into the workflow include profile ... [More] alignment using either Infernal or STAP, chimera checking with Mallard, OTU clustering and determination with OTUHunter, taxonomy assignment with STAP and then a variety of file formatting options to automatically generate results files using Unifrac, Cytoscape, Dendroscope, heat map visualization. Diversity statistics such as Chao1, Shannon, Rarefaction and rank-abundance are also automatically generated. NOTE: The WATERS download to the left is a "stand alone" version for Mac OSX 10.5 (Leopard) only. In order to use WATERS on another system, you will need to first follow the instructions in the NonLeopardInstall wiki page. [Less]